Lessons
1. Introduction
2. Research Mandates
3. Occupational Health Issues
4. Alternatives Search
5. Humane Standards
6. Housing
7. Acclimation & Quarantine
8. Detecting Pain and Distress
9. Genetics
10. Biological Features
11. Procedures for Injections and Blood Collection
12. Polyclonal Antibody Production
13. Analgesics, Sedatives, and Anesthetics
14. Surgery
15. Supportive Care and Monitoring
16. Euthanasia
17. References
Welcome to the course Writing an Animal Protocol for Research on Rats. This is the rat module in a course series on the preparation of an animal use protocol. Each course in this series refers to a different animal species. Every course offers information that is both pertinent to all research animals and specific to the one animal species presented.
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The goal of this course is to cover important information about using rats in biomedical research settings. If you are responsible for handling rats or if you must write an animal use protocol, this course will be useful by providing you with:
Hypertext links in this course provide you with supporting information, such as regulatory sources, drug doses, practical tips, etc. This course will not provide you with detailed information on how to conduct the methods and procedures described. For this, you should use other courses offering in-depth information and hands-on instruction from your institution's animal facility staff. Click to view the credits for this course. |
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To ensure the humane treatment of laboratory animals, animal research is regulated by two federal agencies:
The USDA and PHS mandates on animal welfare differ greatly with respect to the laboratory strains of mice and rats. These species are not covered by the USDA but are included in PHS regulations and policy. However, the USDA may eventually regulate these species as well. If your institution receives any funding from the PHS or is accreditated by the Association for Assessment and Accreditation of Laboratory Animal Care, International (AAALAC), then your research must also comply with the National Research Council publication, the Guide for the Care and Use of Laboratory Animals. This document will simply be referred to as the Guide in this course. |
The Public Health Service Policy requires institutions to have an occupational health and safety program for individuals working with laboratory animals. This requirement is also reiterated in the Guide. It is the responsibility of principal investigators to assure that their laboratory staff are informed of and participate in their institution's occupational health and safety program. Elements of an occupational health and safety program, including institutional responsibilities, are described in the guideline, Occupational Health and Safety in the Care and Use of Research Animals (shown at right), published by the National Research Council. |
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Working with rats is associated with the following hazards:
Injuries
Allergies
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Zoonoses In general, transmission of zoonotic disease from naturally infected laboratory animals is uncommon because of the ongoing efforts to improve the health status of animals by vendors of specific pathogen free animals and by facility staff. Experimentally infected animals are a source of zoonotic transmission to humans. Also, contact with wild rats in field research may expose humans to zoonotic agents carried by this species. Health surveillance programs, routine sanitation, and personal protective equipment have important roles in preventing zoonoses. Rats can be a reservoir of the following infectious agents that are transmissable to people: Viruses
Hantavirus is a bunyavirus carried by wild mice and rats. The virus is transmitted to man by excretions and aerosols from the lungs, saliva, and urine of infected animals. Humans are at risk for Hantavirus infection (Korean Hemorrhagic Fever) primarily from wild rodents (e.g., the wharf rat or cotton rat). Strains vary in symptoms based on geographical origin (US, Asia, Scandinavian, and Europe). Hantavirus occurring in the southwestern U.S. causes a severe pulmonary syndrome. Viral strains orginating in Asia produce a hemorrhagic fever and nephropathy. Strains originating in northern Europe generally produce renal symptoms of less severity. Researchers performing field studies on wild-caught rodents are at particular risk. To see recommendations for preventing exposure to hantavirus infection in field study environments, click here. Bacteria
Rats may be a reservoir for Leptospira spp. bacteria, which are shed in the urine. Transmission occurs by contact with urine and tissues, or inhalation or ingestion of aerosol droplets. Humans with leptospirosis may have influenza-like symptoms, orchitis, rash, skin and mucosal hemorrhage, hemolytic anemia, hepatorenal failure, jaundice, encephalitis, and pneumonia. Click here for information on human leptospirosis from the CDC website. Fungi
For more information, refer to Occupational Health and Safety in the Care and Use of Research Animals, published by the National Research Council. |
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Your protocol form should ask you for an assurance that you have considered alternatives to the use of animals if painful or distressing procedures are proposed. This is to satisfy a mandate by the Animal Welfare Act and PHS Policy to avoid or minimize discomfort, pain, and distress consistent with sound scientific practices. Alternative procedures are those which may replace animals with nonanimal methods, reduce the number of animals used, or refine the methodology to minimize animal pain or distress. For more information on what is meant by alternatives to the use of animals, please refer to the course Working with the IACUC, which is part of this series. |
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The assurance often takes the form of a written narrative that describes which sources were used to determine that alternatives were not available. Typically, you may be asked to provide the results of a database search including information on:
It is strongly recommended that this information be sought during development of a protocol. |
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Organizations that can assist you in performing an alternatives search are:
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The following is a case study of alternatives searches that may guide you in the development of a search strategy that is pertinent to your own research. Click on each database below for a sample search on key terms for this example.
Example Search:
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All of the federal laws, regulations, policies and guidelines applicable to animal research have a core intent to ensure the humane treatment of the animals involved in a study. Accordingly, your IACUC will have requirements for the proper care of your animals prior to, during, and after a research procedure. What is a procedure? A procedure is any activity carried out on the animal, such as controlled behavioral observation (e.g., use of a maze), venipuncture, or surgery. Peri-procedural care requirements include:
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The investigator has the responsibility to see that staff working with the animals are properly trained not only to perform the procedure humanely but also to provide the necessary supportive care to the animals.
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When performing any procedure, such as a blood collection, you should think through the steps that are necessary to protect the animal's welfare. For example, for blood collection, you should limit the volume to the minimum that may be taken safely. That amount may vary depending upon whether a single sample is taken or multiple, chronic collections are done And, with any venipuncture, you should be prepared to care for the animal in the event of trauma to the vein or excess hemorrhage. Refer to your institution's IACUC and attending veterinarian for specific guidelines. |
Your protocol form may ask you which type of housing you may need for your rats. There are important considerations in the selection of animal housing that affect the welfare of your animals. Rodent caging has two types of flooring: solid and wire mesh.
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Because of data on rodent preferences for solid flooring and the risks for animal injury on wire mesh flooring, the use of wire bottom cages should be scientifically justified and approved by your institution's IACUC. Related guidelines are: Example Alternatives Search:
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Upon arrival at your facility, your rats should have an acclimation period before they are used in research studies. This period of time allows animals to adapt to a new environment. Effects of transportation stress include alterations in various blood parameters, immune cell function and animal behavior. The period of time necessary for biological stabilization will depend on the parameters to be studied. Refer to your institution's attending veterinarian for recommendations that are appropriate for your project. Typically, acclimation periods range from 4 days to 1 week. Example Alternatives Search:
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Routine quarantine procedures may prolong the holding of your animals in special facilities. Quarantine aims to prevent transmission of diseases between new animals and established colonies. Acclimation and quarantine periods run concurrently, although they serve different purposes. Most institutions do not allow experiments on animals while quarantined.
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If your proposed study involves a painful procedure, the protocol form may ask for a method of assessing if the rats are experiencing pain or distress. Assessing pain and distress in rats is difficult at times because rats, like many other species, commonly conceal outward signs of moderate pain and distress. In this case, the behavioral changes that reveal a rat's pain and distress may be subtle and detectable only with specialized behavioral methods.
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Severe pain and distress causes overt clinical signs in rats. Laboratory staff working with rats should be trained to recognize these abnormalities in:
The image below shows porphyrin staining and encrustation on a rat's nose. This is a nonspecific sign of pain or distress.
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A chronic state of pain or distress may be more subtle and difficult to detect. A good knowledge of the animal’s normal appearance and behavior is especially important to recognize chronic pain or distress. For methods on assessing and alleviating pain and distress in rodents, refer to another course in this series, Post Procedure Care of Mice and Rats in Research: Minimizing Pain and Distress. Example Alternatives Search:
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Inbred strains and outbred stocks of rats produce animals that are used for different purposes. The decision to use isogenic inbred strains or non-isogenic outbred stocks is determined by the experimental strategy.
Please check with your animal resource department for information on vendor choices as animal source affects animal health status.
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Though rats share many anatomical and physiological features with humans, rats have many unique biological characteristics. A knowledge of species-specific characteristics is helpful to effectively manage these animals and to plan experimental procedures for their use. Researchers should be aware of the following practical features of rat anatomy and biology. Click on the following items for a brief description and some practical tips. Anatomy Gastrointestinal
Metabolism |
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The following are volume recommendations for intravenous fluid administration and blood collection in adult rats:
aRemoving greater quantities of blood (exceeding 10% of total blood volume) can produce hypovolemic shock. Repeated collections of smaller amounts of blood will have the same effect. In such procedures, animals should receive warmed, physiological fluids to replace the volume of blood collected. In addition, monitor the animal’s hematocrit for anemia. bAnimals should be exsanguinated only under anesthesia; volumes shown refer to adult rats. From:
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Below are peripheral vessels that are commonly accessed for blood collection or fluid administration. Recommended needle sizes are 23 to 27 gauge. Larger needles may be necessary for injecting large volumes or viscous materials.
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Below are the nonvascular routes of injection that are commonly used in rats. Included are volume recommendations for the safe administration of fluids acutely in adults (average 200 g). Recommended needle sizes are 23 to 27 gauge; larger needles may be necessary for injecting viscous materials. Subcutaneous (SQ or SC) - 25 ml/kg Intraperitoneal (IP) - 25 ml/kg Oral (PO) - 10 ml Intradermal (ID) - 0.05 ml/site Intramuscular (IM) - 0.1 ml per site From:
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Example Alternatives Search:
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When using any animal species for polyclonal antibody production, the issues below and on the following screen should be addressed within the animal protocol. For more detail, refer to the Institute for Laboratory Animal Research publication, ILAR Journal Volume 37(3) Adjuvants and Antibody Production, 1995.
Antigen Preparation
Adjuvant Used
Recommendations for FCA from the Institute of Laboratory Animal Research are as follows:
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Booster Frequency
Injection Site Selection and Preparation
Post-injection Observations
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Because rats have a high rate of metabolism, drugs are rapidly eliminated from their bodies. Dose rates appropriate for larger species produce ineffective drug concentrations when used in rats. This section includes dose rates for the common drugs and drug regimens used in rats. If you need to use other drug agents, check with your institution's veterinary staff for assistance in determining a dose rate appropriate for use in rats.
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Click on the drug types for doses of common agents and drug regimens that may be used in rats:
Analgesics:
Sedatives:
Sedatives + Analgesia:
Anesthetics:
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The practice of using hypothermia as an anesthetic for neonates is generally discouraged. It is not clear whether the depression of neural function by hypothermia is sufficient to prevent the sensation of pain related to a surgical procedure. Also, the recovery from hypothermia may be a painful experience in animals, as it is known to be in humans. An acceptable alternative to hypothermia for neonates may be a non-explosive inhalational agent such as halothan delivered using a non- rebreathing system. |
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Example Alternatives Search: For additional information on anesthesia in rats, including the physiological impact of anesthetic agents on rats, please refer to the examples of "alternatives" searches provided. |
Aseptic technique should be used when performing surgery on rats. The standards described here are consistent with the Guide for the Care and Use of Laboratory Animals. |
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Surgery on rats should be performed in a location that allows for a physical separation of the operative field from other functions of the procedure (such as animal preparation and anesthetic recovery) and other laboratory activities. The isolation of the operative field avoids contaminating sterile areas with animal fur, bedding, nonsterile supplies, etc. The location used for the operative field should be cleaned and sanitized before use. Materials and supplies used in support of the procedure should be positioned and managed to avoid contaminating sterile areas.
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Surgical procedures in rats should be conducted using aseptic technique. Nonaseptic methods are not acceptable. Rodents have been shown to develop subclinical infections, a consequence which has led to an outdated belief that rodents tolerate nonaseptic technique without developing postoperative infections. The Guide recommends methods for adapting aseptic technique to the scale of rodent surgery. In this way, efficiencies and economies can be realized without sacrificing asepsis. |
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Supportive care aims to:
Supportive care includes monitoring both physiological parameters and analgesia during anesthetic and surgical procedures. Monitoring of vital signs and pain should be conducted throughout the procedure and the recovery period. The photo shows the monitoring of analgesia in a rat (assessing the toe pinch reflex).
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Keep in mind that:
Due to the interaction of metabolic factors and drug effects that can cause animal mortality, rats should receive good supportive care and monitoring during anesthesia, whether or not the procedure involves surgery. |
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During anesthesia and surgery, the following procedures are recommended. Supportive Care:
Monitoring during Anesthesia:
The photo shows a rat with the trachea intubated, ready to be connected to a ventilator.
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After anesthesia and surgery, the following procedures are recommended. Monitoring post Anesthesia:
Monitoring Post Procedure:
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The term euthanasia is derived from Greek and means "good death." Animals should be euthanatized when killed for any purpose, including research. To euthanatize a rat, you must be trained in the concepts of euthanasia, the method to be used, and the proper handling of rats. Methods are classified as acceptable or conditionally acceptable, as set by the American Veterinary Medical Association. The inclusion of conditionally acceptable methods in your protocol may require scientific justification and IACUC approval. The photo shows a CO2 chamber for euthanatizing rodents.
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Click on each method below for recommendations on its use. Acceptable Methods:
Conditionally Acceptable Methods*: *The inclusion of conditionally acceptable methods in your protocol may require scientific justification and IACUC approval. |
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Euthansia:
Very Important! Before placing euthantized rodents in a bag and placing the bag in a necropsy refrigerator or freezer, you must make sure the rodents are really dead! Rodents can stop breathing for a minute or more then regain respiratory function and survive. This is particularly true of younger rodents, which are somewhat resistant to carbon dioxide asphyxiation and take longer to succumb than adult rodents. To ensure death in rodents euthanatized with carbon dioxide, the chest cavity may be opened with scissors, or the rodents may be observed for an extended period of time to make sure they are dead. Your institution may have specific requirements. The Office of Laboratory Animal Welfare (responsible for enforcing PHS policy) has made it clear that rodents remaining alive in bags after ineffective euthanasia is a serious breach of PHS policy, and must be reported to regulatory officials. Example Alternatives Search:
"REPORTING OF NONCOMPLIANCE Unintended recovery of animals after apparent death from CO2 (e.g., in necropsy coolers) is a documented occurrence. Institutions are reminded that such incidents constitute serious noncompliance with the PHS Policy and serious deviation from the provisions of the Guide for the Care and Use of Laboratory Animals (http://www.nap.edu/readingroom/books/labrats/). As such, the IACUC, through the Institutional Official, must promptly provide OLAW with a full explanation of the circumstances and actions taken. Prompt reporting in accordance with PHS Policy requirements (PHS Policy IV.F.3) is an essential component of the formal relationship between OLAW and PHS-Assured institutions." Click here to see the entire source document on the OLAW website. |
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Federal Laws, Regulations, Policies:
Guidelines:
Texts:
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